docs(website): dedicated page per bundled + optional skill (#14929)

Generates a full dedicated Docusaurus page for every one of the 132 skills
(73 bundled + 59 optional) under website/docs/user-guide/skills/{bundled,optional}/<category>/.
Each page carries the skill's description, metadata (version, author, license,
dependencies, platform gating, tags, related skills cross-linked to their own
pages), and the complete SKILL.md body that Hermes loads at runtime.

Previously the two catalog pages just listed skills with a one-line blurb and
no way to see what the skill actually did — users had to go read the source
repo. Now every skill has a browsable, searchable, cross-linked reference in
the docs.

- website/scripts/generate-skill-docs.py — generator that reads skills/ and
  optional-skills/, writes per-skill pages, regenerates both catalog indexes,
  and rewrites the Skills section of sidebars.ts. Handles MDX escaping
  (outside fenced code blocks: curly braces, unsafe HTML-ish tags) and
  rewrites relative references/*.md links to point at the GitHub source.
- website/docs/reference/skills-catalog.md — regenerated; each row links to
  the new dedicated page.
- website/docs/reference/optional-skills-catalog.md — same.
- website/sidebars.ts — Skills section now has Bundled / Optional subtrees
  with one nested category per skill folder.
- .github/workflows/{docs-site-checks,deploy-site}.yml — run the generator
  before docusaurus build so CI stays in sync with the source SKILL.md files.

Build verified locally with `npx docusaurus build`. Only remaining warnings
are pre-existing broken link/anchor issues in unrelated pages.
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---
title: "Codex — Delegate coding tasks to OpenAI Codex CLI agent"
sidebar_label: "Codex"
description: "Delegate coding tasks to OpenAI Codex CLI agent"
---
{/* This page is auto-generated from the skill's SKILL.md by website/scripts/generate-skill-docs.py. Edit the source SKILL.md, not this page. */}
# Codex
Delegate coding tasks to OpenAI Codex CLI agent. Use for building features, refactoring, PR reviews, and batch issue fixing. Requires the codex CLI and a git repository.
## Skill metadata
| | |
|---|---|
| Source | Bundled (installed by default) |
| Path | `skills/autonomous-ai-agents/codex` |
| Version | `1.0.0` |
| Author | Hermes Agent |
| License | MIT |
| Tags | `Coding-Agent`, `Codex`, `OpenAI`, `Code-Review`, `Refactoring` |
| Related skills | [`claude-code`](/docs/user-guide/skills/bundled/autonomous-ai-agents/autonomous-ai-agents-claude-code), [`hermes-agent`](/docs/user-guide/skills/bundled/autonomous-ai-agents/autonomous-ai-agents-hermes-agent) |
## Reference: full SKILL.md
:::info
The following is the complete skill definition that Hermes loads when this skill is triggered. This is what the agent sees as instructions when the skill is active.
:::
# Codex CLI
Delegate coding tasks to [Codex](https://github.com/openai/codex) via the Hermes terminal. Codex is OpenAI's autonomous coding agent CLI.
## Prerequisites
- Codex installed: `npm install -g @openai/codex`
- OpenAI API key configured
- **Must run inside a git repository** — Codex refuses to run outside one
- Use `pty=true` in terminal calls — Codex is an interactive terminal app
## One-Shot Tasks
```
terminal(command="codex exec 'Add dark mode toggle to settings'", workdir="~/project", pty=true)
```
For scratch work (Codex needs a git repo):
```
terminal(command="cd $(mktemp -d) && git init && codex exec 'Build a snake game in Python'", pty=true)
```
## Background Mode (Long Tasks)
```
# Start in background with PTY
terminal(command="codex exec --full-auto 'Refactor the auth module'", workdir="~/project", background=true, pty=true)
# Returns session_id
# Monitor progress
process(action="poll", session_id="<id>")
process(action="log", session_id="<id>")
# Send input if Codex asks a question
process(action="submit", session_id="<id>", data="yes")
# Kill if needed
process(action="kill", session_id="<id>")
```
## Key Flags
| Flag | Effect |
|------|--------|
| `exec "prompt"` | One-shot execution, exits when done |
| `--full-auto` | Sandboxed but auto-approves file changes in workspace |
| `--yolo` | No sandbox, no approvals (fastest, most dangerous) |
## PR Reviews
Clone to a temp directory for safe review:
```
terminal(command="REVIEW=$(mktemp -d) && git clone https://github.com/user/repo.git $REVIEW && cd $REVIEW && gh pr checkout 42 && codex review --base origin/main", pty=true)
```
## Parallel Issue Fixing with Worktrees
```
# Create worktrees
terminal(command="git worktree add -b fix/issue-78 /tmp/issue-78 main", workdir="~/project")
terminal(command="git worktree add -b fix/issue-99 /tmp/issue-99 main", workdir="~/project")
# Launch Codex in each
terminal(command="codex --yolo exec 'Fix issue #78: <description>. Commit when done.'", workdir="/tmp/issue-78", background=true, pty=true)
terminal(command="codex --yolo exec 'Fix issue #99: <description>. Commit when done.'", workdir="/tmp/issue-99", background=true, pty=true)
# Monitor
process(action="list")
# After completion, push and create PRs
terminal(command="cd /tmp/issue-78 && git push -u origin fix/issue-78")
terminal(command="gh pr create --repo user/repo --head fix/issue-78 --title 'fix: ...' --body '...'")
# Cleanup
terminal(command="git worktree remove /tmp/issue-78", workdir="~/project")
```
## Batch PR Reviews
```
# Fetch all PR refs
terminal(command="git fetch origin '+refs/pull/*/head:refs/remotes/origin/pr/*'", workdir="~/project")
# Review multiple PRs in parallel
terminal(command="codex exec 'Review PR #86. git diff origin/main...origin/pr/86'", workdir="~/project", background=true, pty=true)
terminal(command="codex exec 'Review PR #87. git diff origin/main...origin/pr/87'", workdir="~/project", background=true, pty=true)
# Post results
terminal(command="gh pr comment 86 --body '<review>'", workdir="~/project")
```
## Rules
1. **Always use `pty=true`** — Codex is an interactive terminal app and hangs without a PTY
2. **Git repo required** — Codex won't run outside a git directory. Use `mktemp -d && git init` for scratch
3. **Use `exec` for one-shots**`codex exec "prompt"` runs and exits cleanly
4. **`--full-auto` for building** — auto-approves changes within the sandbox
5. **Background for long tasks** — use `background=true` and monitor with `process` tool
6. **Don't interfere** — monitor with `poll`/`log`, be patient with long-running tasks
7. **Parallel is fine** — run multiple Codex processes at once for batch work